rs233997914 SNP Detail

Summary

• ID
  rs233997914
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138359183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGATTGTA TAGAAAAGCC CACACAATGT
  CTTCGGTCCT TAAGTCTGCC CCTTAATGTC ACTAAAGGTT AACCAATGAT AAActgcccc
  ccaaaaatgt gtaaaaggtg tgtgctttag ctactcgggg tcgcttctat tctgatttca
  S
  accgacccca gcgtgctgga ttaataaacc tcttgctgtt tgcatcgatc tccatctctg
  cgtctctgtg agtgggacat cccggacgta aggcttttcg ggtcttacaC CTACACAGGA
  AAAAGTCACA CATGTTCTGA TTCATGGTGT                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320980850	CHEV_3_138316386	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233997914					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138359183 () rs orientation: forward

Symbol	Name	Function Class
Rr586176	regulatory region 586176	1763 bp distal
Rr586177	regulatory region 586177	1321 bp distal
Rr586178	regulatory region 586178	384 bp distal
Rr586179	regulatory region 586179	261 bp proximal
Rr586180	regulatory region 586180	1408 bp proximal