rs233962413 SNP Detail

Summary

• ID
  rs233962413
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106797633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCCACACC TACAAGTGAG TCACCCACAC
  AGACTGTGCG TCAGGAAGAC CTGTGATATA TGGATGGACA AAAGACAGTG TGCTCCTACA
  TGATTTATAG AAATTCACCA AGGTACTCAA AAGTGTGTCC TGAAGCTCAC CTAAACCAGG
  W
  TGCCAGGAAT GTTAGATTCC TGTACTTACA CATCTATAGA GGTGGAAAGA AGCAACCTTG
  ACCTGTGCTT GACCTATGCA ATTCAACAAG CTCTCAAGGT GATATTAACA TACTGTCTTA
  GAATCAAGTG ACAAAGGAAC TGAATTGGAC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321886893	CHEV_6_106770666	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233962413					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106797633 () rs orientation: forward

Symbol	Name	Function Class
Rr635975	regulatory region 635975	77 bp proximal
Rr635976	regulatory region 635976	1755 bp proximal
Rr635977	regulatory region 635977	1838 bp proximal