rs233940550 SNP Detail

Summary

• ID
  rs233940550
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:88463651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGAGTAAG TGGGGTATTT ATATAATATC
  CTTCAAGAAT AAAGAGTGTA TAGGCAGAAT TTCTAAAGTC TTGATACAGG GCCAGCAACT
  GAAAATAGCA CCAACCTGTT TAACTATGGT TTGAGgtgtg tgtgtgtgtg tgtgtgtgtg
  W
  gagagagaga gagagagaga gagagagaga ATGCCTGCAC AATGTGCAGG TGGATGGAAA
  ATGTAGACCA AAGAAAGCAA TGTCCTTGAT GGATTATGGA AGATTTAAAT AAATGAAAGT
  ATGTTTAACT CAAAAAGGAA GCTTGCATAG                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321203571	CHEV_4_88191318	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233940550					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88463651 () rs orientation: forward

Symbol	Name	Function Class
Rr595011	regulatory region 595011	1203 bp distal
Rr595012	regulatory region 595012	1323 bp distal