rs233808324 SNP Detail

Summary

• ID
  rs233808324
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83544307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATGTGTGT GTGTGTGTGT
  GTGTGTGTGT ATGCACGTGC ATGCAGCCCT GCATGTGCCA CAGTGCACAT GTGGAGGTCA
  GAGGACAGCT TGTGGAGTCA GTTCCATCCT TCCTTCACGT GGGCTCCAGG GATTGAATAC
  CATACTTGCG TGACAAGTAC TTTACCCATA AGACATCTCT CTAGCCTGCC ATTAAAAAAA
  W
  TTTTTTTAAC TTGAATTCCT CCCTTCTAAT GTCTGAGGGA AAATGATCAT GAACAAGTAT
  TTTTGTATAG AAACAGTTCA CTCAGAAAGT CATGAGGACA GTCAATAAAA GATGCACTAA
  GGATCCTTAT CTCATATTTT CTGGTTTCTG AAGTTAATCA TGGAAGAAGA AAGCCTGAGC
  ACGGGAGAGC CCTTCTTTGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321844560	CHEV_6_83517319	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233808324					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83544307 () rs orientation: forward

Symbol	Name	Function Class
Gm21284	predicted gene, 21284	714 bp upstream
Rr632893	regulatory region 632893	1645 bp proximal
Stambp	STAM binding protein	Intron