rs233800740 SNP Detail

Summary

• ID
  rs233800740
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:137820316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTGAAAGA GAATTTGTTG AAGTAGAACA
  TTAGCATAGA TAGTGCGTAG GGACGCACTC GAATAGCAGC AGAAATTGTT GTAGGATAGT
  GGGATAAAAT GATGAGGTGT CCTATAAAAT GCGCTGTCCT CTTTTAAAAT GGCCTGAGCA
  W
  CTGGTAAGCA TGGAATACAT TTAGATTCAC ACAAGCTGGA AAATGGTAAA CAGCCCCTTA
  GCCCACCCCA AATAGCCACT GTTACTCTTT CTTTGTGTAG CCACATACTT TTTGCAATTT
  GATGCATTTA Aggactctca taacatgggt                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320522697	CHEV_2_137804132	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233800740					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:137820316 () rs orientation: forward

Symbol	Name	Function Class
Rr565959	regulatory region 565959	290 bp distal
Rr565960	regulatory region 565960	372 bp distal