rs233745895 SNP Detail

Summary

• ID
  rs233745895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9663762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCAAGTC TGGCATTCGC
  ATAATTTTGA CTGGCTACTC AGTCTCCTAA AATGGAGCCA GTGCTGTCCA AGACCATAGG
  GAAGCAGGAA CATCCCAGAA GTCTCCTGGT CAATAAAGCG CACGGAACCA AGTCCTCACA
  GGGCAAGCAC AGAAGGCCCC TTCTTCACAC TCATGGACTC AGGTCTGCTG CACCTACATG
  R
  CAGTACATAC GTGTAACCTC GGGGCTGAGG AGGCAGAGAC AGGATCTCTA GGGCTCACCA
  GCCAGTCAGT TTAGCTGACT CAATGTTTAG TAACGTACAT AGTTTCAAAA AAAGAAAGTG
  CTGGGATTGG AGCTAGGTAG CACTGGCTGT TGCTCTTGCC GAGAACCAAC CTGGGTTTGT
  TTCCCAGGAC CCAGAAGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320651636	CHEV_3_9598702	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233745895					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9663762 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573453	regulatory region 573453	367 bp distal
Rr573454	regulatory region 573454	421 bp distal
Rr573455	regulatory region 573455	1001 bp proximal
Rr573456	regulatory region 573456	1958 bp proximal
Zfp704	zinc finger protein 704	Intron