rs233592499 SNP Detail

Summary

• ID
  rs233592499
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152447851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCTAGGA GAGGGCTTGG
  GGGCTGAAGG GCTGGTCCGG GAACTGGGGT GAGCGGCCGG TCTCCCGTGC TCTGTGACTA
  GTTGGAGCTG TACCACACCG TGATGTATCG CAACTACCAA AGAAAGAATG ACATGGACGA
  ACCGCCACCC TTTGATTACG GCTCTGGCGA TGAGGATGGT AAGAGCGAGA AACGGAAGAA
  T
  AAGGACCCTC TCTACGCCAA GATGGAGGAA CGCTTCTACC GCTACGGCAT CAAGCCCGAG
  TGGATGATGG TTCACCGCAT CCTGAACCAC AGGTGAGGGT GTTGGGTAGC ACCTGCCGGG
  TGAGGGCTGT CCAGGCTTGC CTTTCAGAGC CAGGAGTAGG CTCAGTGGGG CAGGAGCCGA
  GTAAGGACAT CTCACTGCAG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434322	CHEV_4_151737503	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233592499					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152447851 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Coding-Synonymous
Rr605861	regulatory region 605861	1886 bp proximal