rs233536288 SNP Detail

Summary

• ID
  rs233536288
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129188678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCATCCAGT ACTACAGAAA AACCTGTTCT
  TTGGGCCCAT TCATTCtatt attattatca ttattaattc tattattatt attattaatt
  attTCATATA CTATATCCAT ACCACAGCCT CCCATTCTCT CCATTCCTCC TAGTCTACCC
  M
  CCACCCCCCA ACTCATTCTT TTTTTCCTTT AGTTAGGGTA GGGTTAGGAT TAGGATTTTT
  TGTTTTGTTT TTGTTTTTTT GTTTGtttgt tttttcgaga cagggtttct ctgtgtaggt
  agccctggct gtcctggaac tcactctgta                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321311709	CHEV_4_128972129	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233536288					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129188678 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14888	CpG island 14888	726 bp distal
Rr600195	regulatory region 600195	339 bp proximal
Rr600196	regulatory region 600196	1020 bp proximal
Sync	syncoilin	Intron