rs233410826 SNP Detail

Summary

• ID
  rs233410826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5437291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTCCCTC TTCCTTCATT
  CCTTCCTTCC TCCTCCCTTC CTCCCTCCCT TCCTTCCTTC TTTCCTCCCT TCCCTTCCCT
  TTCCTCCCTC CTTCCCTTTT CTTCCTTCCT TCCCTTCCCC TTCCTTCCTA TTCCCCTCCC
  CCTCCCTTCC CCTCCATCCC TCCCTTTCTT TTCCTTCCCT CCCTCTGTCC CTTCCTCCCT
  Y
  CTTTCCTCCC TTATTTTCCT TCTTCCTTCC TTTCCTTCCC TTCCCCTCCC CTCCCCTCCT
  CTTCCCCTCC CCCTTCCCTT TCCCTCCTTT GCTACCTCCC TTCCTCTTCT CTTCCCTCCC
  TCTCTCTGTC TCTTCCTCCC TTCTTTCCTT CCTTCTTTTC CTTTTCCCTG TCAGTTTTTC
  CTTTGCTTTC CGCCTCTCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729103	CHEV_6_5387291	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233410826					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5437291 () rs orientation: forward

Symbol	Name	Function Class
Rr626148	regulatory region 626148	609 bp proximal