rs233395750 SNP Detail

Summary

• ID
  rs233395750
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:9096171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGGTGCC TAAGCATCAA TTCCAGGTGG
  AATCTGTGGT ATCCGCATGG AACCTCCCTG AAGGATTGAC ACTATATCCC CTTTTGCTGT
  CTAGCTGTTT TCAGTGTTCT TGTAGAAAGG CAGCCTTTCT CAAATTGTTG TTTATCTCAG
  K
  GGCCTTACTA TTCAAGATAC TACATTGCAT CATAAAATAT AACTTAAAAT ACTGTCATCT
  CTTTTATTTC CCCCTCAGAT TGACTACACA AGAAATTTTT AGTGAATCAG GACTTTCTAT
  ATTACTTGAA TGTAAAAAGA GGTTTCTGTA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321738847	CHEV_6_9046171	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233395750					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9096171 () rs orientation: forward

Symbol	Name	Function Class
Nxph1	neurexophilin 1	Intron
Rr626465	regulatory region 626465	1192 bp proximal
Tssr54933	transcription start site region 54933	218 bp upstream