rs233321632 SNP Detail

Summary

• ID
  rs233321632
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129996955 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGGGAAG ACACTATTGG
  CTGACAGCCT GCGTTATGAA AGCATCAGCT CTCCCTGGGC CTGCTGGGTG AGGAGCAGGT
  AAAAGCCTGG TACCTCCATT TTTACTTTAT GGGCCTCAAG CCCTATGACC CGAGTTTGGT
  CTTTCCAGCT CTGGTGGAAG AACTGATTGC AAGTAAGTGT CCTCCGACCT CCACATGCGC
  R
  CGACAACCTT TGAGTCAAAT TACTGCTCAT CTCTGCACGG AGCTGTGCCA GTCATCTAAG
  GAATGTTCTA CAGAACTGGG AGTCTTCCCC ATTCAAGACC AAAGTCAACA AGGTGAGAGT
  GGCTGAGGTA TATTCAAGAT TTGAAGAGAC GACATAACAT TGTCAGAGAA GGCAAGGACT
  TAGGAAATTG GGAGGGGGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321317073	CHEV_4_129780406	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233321632					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129996955 () rs orientation: forward

Symbol	Name	Function Class
Rr600438	regulatory region 600438	1454 bp distal
Rr600439	regulatory region 600439	594 bp distal
Rr600440	regulatory region 600440	95 bp distal
Rr600441	regulatory region 600441	658 bp proximal
Rr600442	regulatory region 600442	1340 bp proximal
Tssr39229	transcription start site region 39229	1724 bp upstream