rs233311465 SNP Detail

Summary

• ID
  rs233311465
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152362941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTGGTG TGTCTGAAGA
  TACCTGTAGT GTACATGTCC ATAAATAAAT AAATAAACCT TAAAAAGAAA AAAAAAGATG
  CTTTAAAAAA AAAAGATTTA TTTTATGTAT GTGAGTACAC TGTAGCTGTA TAGATGGTTG
  TGAGCCTTCA TGTGGTTGTT GGGAATTGAA TTTAGGACCT CTGCTCGCTC CGGTCGGCCC
  A
  CTCGCTCCGG TCAACTCTGC TCACTCAGTC CCTGCTTGCT CCGGCCCAAA GATTTATTTA
  TTATTATATG TAAGTACACT GTAGCTGTCT TCAGACACAC CAGAAGAGGG TGTCAGATCT
  CATTACAGAT GATTGTGAAC CACCATGTGG TTGCTGGGAT TTGAATTCAG GACCTTTTAG
  AAGAGCAGTC AGTGCTCTTA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434053	CHEV_4_151652593	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233311465					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152362941 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15402	CpG island 15402	620 bp proximal
Gpr153	G protein-coupled receptor 153	Intron
Rr605819	regulatory region 605819	1651 bp distal
Rr605820	regulatory region 605820	1936 bp distal
Rr605821	regulatory region 605821	571 bp distal
Rr605822	regulatory region 605822	368 bp distal
Rr605823	regulatory region 605823	188 bp distal
Rr605824	regulatory region 605824	334 bp proximal