rs233290487 SNP Detail

Summary

• ID
  rs233290487
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74792880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATATTTGT GGTGATCTGA GGAAATGGCT
  CCCACCTCGG GCAGTGATCA GCCCTGGTCA CTCTCTGAGG CCAGCTGGCA GCTCTTCCCC
  CATGCCATCT CTGCAACAGG AGAAGGCTCA ATGAGTGGGT GAGAGCACGG TGGGAAGAAG
  A
  GATAAACTGG GGGTGAGAGG GGGGAGGAGA GGAGGAAGGA AGGGGCTAAC CTACTCCCCT
  GCTGTTGTCC AGAGCCTGGT CCATCTGAGC CTCCCCATTA CCATTTCCTT GTTCCCTGAG
  TCTGTCAAGG GCAGACTTTA TAGCTTCCTC                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320348832	CHEV_2_74800593	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233290487					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74792880 () rs orientation: forward

Symbol	Name	Function Class
Igs15	intergenic site 15	within coordinates
Rr559413	regulatory region 559413	1732 bp proximal
Rr559414	regulatory region 559414	1998 bp proximal