rs233178855 SNP Detail

Summary

• ID
  rs233178855
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107556718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATGAACA CGGAAGTGTA
  TCAAGACAGT CCTCCCCAAG GTCCACAGTG ATAGGCGCAG TGTGAAGAAT CTTGTGTGTT
  CTAACCACAG CTCTCCATCG CTCCCGCTTA GCTATGTCCC TGGAACACAG CCGAGGCCTT
  TGAATCTCAC AGGGCAGAGA CGCTCTCTCT CACCTCCAAT CACACGGCTG CCACAGGCTC
  T
  GCTGGTTCTC CAGGTGCCAT TGGGATTCTG CCAAGTTAGC ATCCTGTGTC TCTGTCCCCT
  GGGTGGCCCG TGAGCCCTGT CTGCATGGCT AGTTTAAATT GAGATGTGCT GAAAGTATAA
  AATACAGACC AGATTTCAAA GATACTGTAC AGGAAAAAAA AGAAAAAAAG AATGCAAATG
  GCTCCAAACT TTTGTATAGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250126	CHEV_4_107372126	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233178855					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107556718 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Gm54855	predicted gene, 54855	1567 bp upstream
Gm70287	predicted gene, 70287	within coordinates
Rr597043	regulatory region 597043	1605 bp proximal
Rr597044	regulatory region 597044	1785 bp proximal