rs233150080 SNP Detail

Summary

• ID
  rs233150080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121655017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCTAAAGA ATCTTCAATT CAAGACTTTA AGGCTCAAAC
  TTAACAGGGA TAAAAATATG AAATCCCACA AAAGCTACTA ACTTGTCATA AACTGTTGGC
  R
  ATAATTAAGA TATGCAAGCT GATAGTCATC TTATAAGTGA TCAAATTCTT TTATGCTCAG
  AACTATATTT CTAGTCATGT AATTAATTTA CAGGGACAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320906469	CHEV_3_121564286	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233150080					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121655017 () rs orientation: forward

Symbol	Name	Function Class
Gm42593	predicted gene 42593	1474 bp upstream
Gm65477	predicted gene, 65477	500 bp upstream
Rr584185	regulatory region 584185	1916 bp distal