rs233122393 SNP Detail

Summary

• ID
  rs233122393
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119073890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctccagaga tcatattgtc tctgcctcta
  gtgctgggat tacacatgtg gaaaagccac caagcctctt ttcacatgga tgctgaggat
  ttgaactcag aaccttctga gtccatggca gacgccttac taactaagcc aactctccag
  M
  ACAGTTTACA AACACCCCCT GTTCCCCATA ATCAAGTCAA AACCAAAACC AAAACGAGTC
  TGTCTTCCCT TCTGTTGAGG GCTTCTCTCT CCTCTGATAG CCCACTCTGC TGCCTTCTGC
  CTCATGTCAC GTCATGATAG TGTCTGTTTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320474379	CHEV_2_119069145	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233122393					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119073890 () rs orientation: forward

Symbol	Name	Function Class
Rr563452	regulatory region 563452	493 bp distal
Rr563453	regulatory region 563453	1523 bp proximal
Spint1	serine protease inhibitor, Kunitz type 1	Intron