rs233104584 SNP Detail

Summary

• ID
  rs233104584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132614115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACAAGTGCT TTAATTCCAG ACAAATAGTG
  ACTTAGATAT CAGATCTCTC CAGGTTTGTG ACATGCTAGA CAGGACAATG AAATGAAATA
  TTTGGGGATC CCATTGGATA AGTTTTCCTA GCCATGTATC TCCCCAAAGT CCATGACATC
  R
  TGCAAGAAAT TTTGATTTGC ATAAAAATGT ACCAGACCAC CCCAACCCTT GCTTCCTATT
  CTGCTCTATT TTCAGAACCC AGGCTCAAAT ATAGGAAAAT TAAGTAGCCT TGACATTCAG
  GTCTGTAGCC AATCAGTGAT TTTAAGGGTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337136	CHEV_4_132442719	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233104584					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132614115 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14976	CpG island 14976	1813 bp distal
Gm13033	predicted gene 13033	388 bp downstream
Gm70413	predicted gene, 70413	588 bp downstream
Rr601103	regulatory region 601103	1491 bp distal
Rr601104	regulatory region 601104	856 bp proximal
Rr601105	regulatory region 601105	1040 bp proximal
Rr601106	regulatory region 601106	1150 bp proximal