rs233043418 SNP Detail

Summary

• ID
  rs233043418
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:12751889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGATGTAT ACATTCAGAT
  ACACATCCTG GTGAGAGAAA AAAAGAAGTA CTACTCACTT GAATAAACTG TATCAATAAA
  CCTGATGAAT GGCCAGAGAT AGTAAGAAAT ACCAACCTTT GTTTTCTAAA ATGATATGAA
  TAATACACAA ATGTTTAATG GTATGATGGC AAAATACAAT CTAGAGAAGT CTCAAGGATG
  C
  AGATTAAATT GACCATCTGT ATAACCTGTC ATGAAGTAAG TCGTTCATCA TTTTTCATGA
  ACTGTTCAAG TATTAATGAC CCAGGACTAT AAAAGTCTTC CAAACCAACA GAGGATAAAT
  GTAAGTTACT TAGAAATGGC ACAATTCTAA CCTAATTGGC AACCTTAATT GTCCATTGCT
  TCTGTGCTAT CATTTCAAAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321745451	CHEV_6_12701890	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233043418					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:12751889 () rs orientation: forward

Symbol	Name	Function Class
Rr626540	regulatory region 626540	1990 bp distal
Rr626541	regulatory region 626541	727 bp distal
Rr626542	regulatory region 626542	589 bp proximal