rs233003444 SNP Detail

Summary

• ID
  rs233003444
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52788176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctttctaac ctgtctgtct gtctatctat
  ctatctatct atctatctat ctatctatct atccatccat cTtttctctc tttctttctt
  tctttctttc tttctttctt tctttctttc tttctttctt tctttctttc tctcttcttt
  Y
  ccttccttcc ttccttcctt ctttccttcc ttccttcctc cctcccctcc ccgttgtctc
  tctctctctc tctctctctc tctctctctt tctttctttc tttctttcCA TCTATCCATT
  CTCTAGCTAT CTATTGAAGA CAGTTACTTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765679	CHEV_3_52684677	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233003444					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52788176 () rs orientation: forward

Symbol	Name	Function Class
Rr576595	regulatory region 576595	1937 bp distal
Rr576596	regulatory region 576596	729 bp distal
Rr576597	regulatory region 576597	1320 bp proximal