rs232980156 SNP Detail

Summary

• ID
  rs232980156
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75847203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTAGATT ATTCTAAAAC
  TGTATCTGAC TGGTTTTATG ATATTGGGCA TTTAATGGAT TATACGAAAC AAGTGAATTT
  ACTTTGATCA TTTGTGGTTA TTAAAGTTAC ATTTCTGTCT CGAAGACGAT ATTCTAATTT
  GTTTGTTTTC AGGGGACTGT GACAGGTCTC TAAAAGTACT GAAAATGAAG TGGCGGGTAA
  R
  TTTGAGACTT AATGGCTTTG AGGTCCTTAA AAAACAATCC TGTGTTCTTA ATGGAGTGGC
  AGATAGTGAG GCACTAAAGA GGCTTTGCCT ATTGAGTGCA TCTCTTTTTG AAGTTAGGCT
  CAGACTGATT GAGCTAGGTC GGGGGTAAAG AACTCACTGG GGTTTCCAGA TGAAAGCAAA
  CGCTTAGCAG CAGAATTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320352410	CHEV_2_75854916	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232980156					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75847203 () rs orientation: forward

Symbol	Name	Function Class
Gm75271	predicted gene, 75271	within coordinates
Pde11a	phosphodiesterase 11A	Intron
Rr559634	regulatory region 559634	36 bp proximal