rs232820026 SNP Detail

Summary

• ID
  rs232820026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75879298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCTTGAAC AACAAGTCTC
  CCACAACTAC TGCTTTCAGC CTAGGTTTAG GGAACAGGTG AGCAGGGCAT AGGTGGAAAC
  CAGGTGTGGA GAATGAAAGG TCTACAGCAA GCTTCCTCAG GCCCTCTAGC TTCTGCATGT
  CTGTGAAAAC TGGGAAGTGG GACAGTGGTG ACATCTGCCT TCCTGATGGC AGAATGGAGT
  R
  GACCCTGGGA CCCAGGGGTT CAGTGCCTTA TACTTTTGCT GGTCATTATC ACTCGGAAGA
  AGCTGGAGTG GAGGCTGACC AATGTGTCAC GCTTAGATGA CACAAACCTT GGGGGGGGGA
  TGGGCTGTTT ATGATCTGTG ATTACAGATG TGGGCTCTCT GGGGGGACTC ATCACACTTG
  CCAGAAAAGA GCAAACCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320352564	CHEV_2_75887011	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232820026					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75879298 () rs orientation: forward

Symbol	Name	Function Class
Pde11a	phosphodiesterase 11A	Intron
Rr559637	regulatory region 559637	843 bp distal
Rr559638	regulatory region 559638	762 bp proximal