rs232806151 SNP Detail

Summary

• ID
  rs232806151
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129268958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTTCTTC GGAGGACGAA
  CGGCCATGTA CAATTCTGGG AAGGTTTAGA ATTAAGTCCA GAAACAACTT AAGAGCTGAG
  CTTTAGAAAT CTGTGTCGCC TCCAAAGTTC AGGCTGAAAG TTCACTCGCA GAGGAGGAAG
  AGTATTATAG GAGCTTTTAG GGGGTGATTA GGCCACCCTG GGGGGAGGGG TGCTGCCCTC
  R
  GGGACGGGAT TAGCATCCTA ATAAAGAGAT TTGGAGGAGT AGGTCTGCTC TCCACCTCAT
  CCCTTCTACC CATTTTACTA ATGAAGGCAC AGCACTGTAT TTACCCTCAT TATGTATGCC
  ACGAAGAGGT GCCTTCCGGG AAGCAGAAAG AAGCCACACA GGGCACCATA ATCTTGTGCT
  TCCCAGCATC TACCAGTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321312482	CHEV_4_129052409	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232806151					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129268958 () rs orientation: forward

Symbol	Name	Function Class
Rr377176	regulatory region 377176	within coordinates
Rr600213	regulatory region 600213	1140 bp distal
Rr600214	regulatory region 600214	487 bp distal
Rr600215	regulatory region 600215	1605 bp proximal
Tssr39144	transcription start site region 39144	163 bp upstream
Tssr43495	transcription start site region 43495	838 bp upstream
Tssr43496	transcription start site region 43496	847 bp downstream
Zbtb8a	zinc finger and BTB domain containing 8a	Intron