rs232712464 SNP Detail

Summary

• ID
  rs232712464
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:76291548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gctatgttg tctatgctcc aagtaaagag
  tcttctgctc atggtcctac aagaaactct aGATATACAG GTGAAGCAAG CAATGCACAC
  ATATGCATCc tctctctctc tctctctctc tctctctctc tctctttctc tctctccctc
  Y
  ctccctccct cactcactcC ACCCCTCCCT CACACACAAA GACTTAAAAA GTACATTGGA
  AAGAACGGTT TCAGAGAGTA GAACAAATAA GAGATGGTAA TGAAGGTATC TATATAATTA
  AAATATGGTG AGAACATGTT CCCCTTTCAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321170662	CHEV_4_76019215	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232712464					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:76291548 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ptprd	protein tyrosine phosphatase receptor type D			Intron
				Noncoding-Transcript-Variant
Rr594093	regulatory region 594093			1567 bp distal