rs232572083 SNP Detail

Summary

• ID
  rs232572083
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105172740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGAATAT TTGCACGTAG
  GAGTAGTCCA CTCACACCCC TCCCTTTCCT ATTCCGGTTC TGTGTGAGGC CAAACTTTTT
  CACACAGTTC AACCAAATAA CAAATCCCTA TGGACAGAAT TAACATGAGA TACCAGAATC
  TGTTTTGCTT GCTGGTTAGT CGGATCCTGG GCAGGGGATA TATAGACTTC AGTGGTAGAG
  Y
  ACTTGCTCAA AATGTGCAAG GCTCTGAGTT CAATCTGTAT TACTATAAGA AAGAAAAAGA
  AAAAATAGTC AGATGTTGAA GATATCTGTA AACACGTGAG ACGATGCAAT CTTTCTTAAG
  AATTTTTATG TAGTTTTTAA ATGTATAACT ATCATTTAGA TTGACATGTA ATAGATTAGT
  CATGTATAAT TTAATTAATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243571	CHEV_4_104988148	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232572083					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105172740 () rs orientation: forward

Symbol	Name	Function Class
Gm40217	predicted gene, 40217	within coordinates
Rr596594	regulatory region 596594	1851 bp distal
Rr596595	regulatory region 596595	105 bp distal
Rr596596	regulatory region 596596	1042 bp proximal
Rr596597	regulatory region 596597	1516 bp proximal