rs232569453 SNP Detail

Summary

• ID
  rs232569453
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109376490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTATTAG TGACACACTT
  GACAGTGCCA GGGGCTTGGA AGAATCATGG TCAGCAAGAA GACTCTAAAC AGGACTGGAC
  CAGGCTGAGG TTATGTAAGG CTGCAAATGG CCTGTGTTTA TCAGTGTTAT CAATTAGGAA
  GCCAATGCAT ACTTGCTTGA GTATATTTGG CAATAGGCAT ATTTGACACT AGGTGAAGAT
  A
  TTTGCACCAA TGATTTCATT TGACTTCACA ATTTCCCCAG GATCGGCTTA AATATCTCAA
  AATCATATGT TAGAAATGGG CTCAGATAAG CTAAGTAACT TACCCAGATC ACTCAAGTAT
  GAAATGTTGA AGTCATTCTT CTAGTGCCCA GTCACAAGAT TCTAAAACCT GTGTTCTTTT
  TTTTTTTTTT TTTTTTTTTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320869320	CHEV_3_109272092	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232569453					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109376490 () rs orientation: forward

Symbol	Name	Function Class
Rr583417	regulatory region 583417	1540 bp distal
Rr583418	regulatory region 583418	1591 bp distal
Rr583419	regulatory region 583419	377 bp proximal
Vav3	vav 3 oncogene	Intron