rs232535811 SNP Detail

Summary

• ID
  rs232535811
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:116461253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAAAAAA ATAAAAAATA
  AAAATAAAAC TCAACAAACC AGAGTAGCTT TCAGTGCCAG TTCGGCTACA TTCCCACTCC
  GCTGAGATTC CTTTGCGTCT TCTATCTTCT CTCGAATTTC AGGTAGCAGT TCTTTCAGCT
  CCTCAATTTC TTTCTCATAT TCAGTAAACG ATCCTTCGGC CTCCTTCATC TGCTCATGGA
  R
  TACAGCTACA AAGAACAGCT TTAAATCACT AACAAAAAAA CCCAGTTTCC CCCCACAATG
  TAAATGACGG TATCACCTAA ACATACAGTA ATTTCTGTTC ACTCACCCAT TCTCTTTTCA
  ATGACATCGA TAGATTTGCC AAACTGTGCT ACTGCTTCAT CATACTGAGA GTTGTAACCA
  TAGGCCAAAC CTAATTGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321277574	CHEV_4_116276661	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232535811					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:116461253 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nasp	nuclear autoantigenic sperm protein (histone-binding)			Coding-NonSynonymous
				Noncoding-Transcript-Variant
Rr597935	regulatory region 597935			1263 bp distal