rs232505366 SNP Detail

Summary

• ID
  rs232505366
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:13958605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGCCTAAA TATACAGTGG
  TTTTGTTTGT TTGTTGTTGT TTGTTTTTTT ATATGATCTT TCACAATCAA ATTTACCCAC
  CTATACAAAC TCTTCACGTT TGATCCAAGT TGTTGGAATT TAATTTACTT GAAAATCTTG
  TAAGAAAGCT AGAGCAGCGG AAAAATCAAA TGCTTACTAG GTTGAAGATG GGCTTCATTT
  W
  AAAAAGGGAT TTGTTACTGT TAATTATGAG TGAGCCTGTG TGTGGGCACA TGCACGAGTG
  CCTGGGGAGA CCAGAGGCTT CCATCCTGAT GGGCTGGAGT TATGGTGTCA GCTGCCTGAC
  TTGGCTGCTG GGAACCAAGG GCGGGGTCTT CTGCAAGAGC AGTTACAGTG AGTGAGCTCT
  TAACCCGCTG ACCCATCTCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322510533	CHEV_8_13908605	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232505366					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13958605 () rs orientation: forward

Symbol	Name	Function Class
Fbxo25	F-box protein 25	Intron
Rr400768	regulatory region 400768	732 bp downstream
Rr660030	regulatory region 660030	792 bp distal
Rr660031	regulatory region 660031	220 bp distal
Tssr76432	transcription start site region 76432	860 bp downstream
Tssr76433	transcription start site region 76433	789 bp downstream
Tssr76434	transcription start site region 76434	768 bp downstream