rs232499824 SNP Detail

Summary

• ID
  rs232499824
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52787410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAGATGGC AAGGGGCCAG
  AGTGGAGAGT CGTGAAGACT TCTGCTTAGC TGTATGATGT AGAAATGGTC CGAGCCTTGC
  TTTCTCTAAT TACAAAGCAG GGTGAACTTT AAATCTGGCA GGGACAAGCC AACAGCTCTG
  TGTCTCAGCA GCAGGTGCTG TCTGTCTGCT CCCCTCCACT GAGCATACTG AGCATGCGCT
  R
  GGCTATTTTG ACAAGTCACT CATTTCTCCC TGAATTATAG CTGACTCTGG AAACATGCTC
  AGTCGTGGAT ATGAACAGAA AAGAACAGAC TCCTTCGGGT AATTTTTAAA AACATTTCAA
  TAAGCCCCCC TCATCAAATG GGTTTTTAGA AAGTCGTGTC TCTTGAGTCT GCCTCTTCCA
  AGAGGGGCTA CAAGTTTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765668	CHEV_3_52683911	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232499824					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52787410 () rs orientation: forward

Symbol	Name	Function Class
Rr576595	regulatory region 576595	1171 bp distal
Rr576596	regulatory region 576596	within coordinates