rs232484343 SNP Detail

Summary

• ID
  rs232484343
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:67055300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACCCAGG ACAGCATAGA
  ACTGTCTCAT TATGAATCCA AAATGTTATG TAATGATTTT AGTCAGAAGT TCTAGTTCCG
  TTGCCTTCTT CCCTTTTCTT CTGTTTCTGA TGCAGCTCTC GGACTATATG CAGTGGCCAC
  CATGAAGTCT GAAGGATAGG AGTAAATATA TACATTTGTA CACTGGCACA TTGTAAAGGG
  K
  ATTCATTAAA CTTCACCCTG AGAAGTTTCA GCGCCAGGGT GAAAGATGCT AAAGAAGAAG
  ATCATATGTC AAGGTATGTC AAAAAGTATC ATATATATAC ATATACATAT ACATACATAC
  ATACATACAT ACATACATAC ATACATACAT ACATATATAT ATATATATAT ATATATATAT
  ACATACATAC ATACATGAAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324388725	CHEV_13_67008172	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232484343					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67055300 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mterf3	mitochondrial transcription termination factor 3			Intron
				Noncoding-Transcript-Variant
Ramacl	RNA guanine-7 methyltransferase activating subunit like			mRNA-UTR
Rr369737	regulatory region 369737			1804 bp downstream
Rr481964	regulatory region 481964			1869 bp distal
Rr481965	regulatory region 481965			1811 bp distal
Rr481966	regulatory region 481966			1247 bp distal
Rr481967	regulatory region 481967			1788 bp distal
Rr481968	regulatory region 481968			1536 bp distal
Tssr123084	transcription start site region 123084			1866 bp upstream
Uqcrb	ubiquinol-cytochrome c reductase binding protein			1858 bp upstream