rs232400869 SNP Detail

Summary

• ID
  rs232400869
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6198089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCCTTAT AGAAACACCA
  GGAGCCGCTG CCACTGCCTG GGGTCCATGG ACGAAGTTTA CAAGAAAATC CAGGGACCCG
  GCCACACCTA GTGATCTTGA TCATATCAGT TATCATTTCG GAGTCTTAAA TCTGCACTTA
  CAAAATGATA AGAAAACCTA CCTTCTAGCT TTCCTATTGG TACCTGACAG GCAATTAGAA
  Y
  GAAGGAGAAA CATCCTCAAA CCTTCAACTG TTAATGTTGA TGTTGACTCC CATAAACCTG
  AAGCAGGCTG ATCCAGACCT TGACCTTGCT GCCACTAAGA TGATTATCTA GGGTGGAGCC
  TTCCTCCCTA GATCACTCTA TTGTTGAGCC ACTGTCACTG TTCCACTTCA AGATACTGCT
  ACCTGCTGAG AGGGCCCAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321731299	CHEV_6_6148089	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232400869					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6198089 () rs orientation: forward

Symbol	Name	Function Class
Rr378877	regulatory region 378877	within coordinates
Rr626219	regulatory region 626219	1106 bp proximal
Slc25a13	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	Intron