rs232314523 SNP Detail

Summary

• ID
  rs232314523
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83975163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCGGGTTG ACCTTGAACT
  CACAGAAATC ACCTGAGAGC TTTGATAAGG TACGAACCAG CACACAGAGA CATAAACTTT
  TAATTAATTC TTTGACAATT TCATACAATA TATTTGAATC CTATTCATTC TTCCAACTCC
  TCTCAGATTC TCCCCCACCC AGCCCTACCT ACCCAACCTC CTTGTATCCT CCTTTAAAAA
  M
  AAAAAACAAA AAAAACCTCA TCAACTCCAA TGTATGCAAC CCACATACTC CAGGGGTGCA
  CTCATCCACT GGAGCATAAC CTACCAAGGC CTTCACCCTT CCCTCCCTCC CTACCCCCTC
  CCTCCCTTCC AGCAGCCTCC AATTGCCAAT AGCTCCTCAA GTGGGAATGG GACCTGTGCC
  CACCTCACCT CTCTGTATTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320822187	CHEV_3_83871778	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232314523					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83975163 () rs orientation: forward

Symbol	Name	Function Class
Gm56775	predicted gene, 56775	within coordinates
Rr397735	regulatory region 397735	1321 bp upstream
Rr578973	regulatory region 578973	1574 bp distal
Rr578974	regulatory region 578974	1299 bp proximal
Rr578975	regulatory region 578975	1585 bp proximal