rs232146426 SNP Detail

Summary

• ID
  rs232146426
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75877678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTAAGGTA CCTGACTTGG
  GTGCTGGAAA CAGAACTCAG GTTCTCTGGA AGAGCAGCAA ACATTGCTCT TAACTGCAGG
  CCTTCACTCC AGCCCAGAGC TTAATAAAAA GTTTTACAAA TACAAACAGA TGTCCTGGCA
  AACAGAGGAG CTAGAAAGTG AGTTGCTTCA GGGGAGGCCC ACCAAAGACC ACTTTATAAT
  Y
  TGTTGGGTAT GGAAGGGAAC TCTGAAAACA CACAAACTTG TATTGTTTCA GATATGGAAA
  TATGTGGAGA AAAAGTGGGC TAGACATTTG GGAATTTTTC TGATCCAGAA ACAAATACTA
  ACTACCTACT AGTAAAGACT TAGCTGGCAT CCTAGAAATC TTTGCTGTGG TGCCAAATGA
  CTTTGAGGGA GAGAGAGGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320352547	CHEV_2_75885391	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232146426					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75877678 () rs orientation: forward

Symbol	Name	Function Class
Pde11a	phosphodiesterase 11A	Intron
Rr559637	regulatory region 559637	519 bp proximal