rs232125403 SNP Detail

Summary

• ID
  rs232125403
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113598565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCCCCTGG AGCTGAAGTT
  CCAGGCAGTT GTGAGTCACC TGGTGTTTTA GGAACCATCT CTTCTCTGAT AGAGCAGTTT
  TAAGTAATGT TAACTGCTGA GCTCCCTCTA GTCCTTATTT TTATTCTTTA GGTTTTTTTA
  AATTTTACTT ACTGTCTTTA TGTATGTATG TGTATGTATG TACTATCAGG TATGTGTGTG
  M
  GCAAACTGCA TGCCTGGTAC CCACGAAAGT GTCCGATCCC CTGGGACTGG GGTCCCATAT
  GGTTGTGAGC TGCCAATCAA ACCAGAGTCG TCTGCAAGAG CAGCCAGTGC TCCTAACCAA
  GGAGCCAACT CTCCACCGTA TTTTTATTTT TAAATCATGT ATGTATGTTT GTTTGTGTAT
  GGGGGCGGGG GGGGGCTTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911124	CHEV_6_113571598	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232125403					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113598565 () rs orientation: forward

Symbol	Name	Function Class
Rr636555	regulatory region 636555	1977 bp proximal
Tssr62461	transcription start site region 62461	1924 bp downstream