rs232123520 SNP Detail

Summary

• ID
  rs232123520
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115980770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTC CTGTTATTTT TCTCCAACTT
  Y
  GAGGCCTTCA GGCCTCGAAA GCATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321917086	CHEV_6_115953827	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232123520					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115980770 () rs orientation: forward

Symbol	Name	Function Class
Gm53336	predicted gene, 53336	within coordinates
Rr637126	regulatory region 637126	1735 bp distal
Rr637127	regulatory region 637127	986 bp distal
Rr637128	regulatory region 637128	within coordinates
Rr637129	regulatory region 637129	230 bp proximal
Rr637130	regulatory region 637130	1149 bp proximal
Rr637131	regulatory region 637131	1813 bp proximal