rs232086382 SNP Detail

Summary

• ID
  rs232086382
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:142236455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGG GGTGGTGAGC GGTTCCTACG
  S
  GAATATCAGC CCAGGGCTAC CCACT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321002547	CHEV_3_142193658	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232086382					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142236455 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13887	CpG island 13887	within coordinates
Gbp7	guanylate binding protein 7	Intron
Gm66604	predicted gene, 66604	within coordinates
Rr586449	regulatory region 586449	342 bp distal
Rr586450	regulatory region 586450	within coordinates
Rr586451	regulatory region 586451	176 bp proximal
Tssr32116	transcription start site region 32116	396 bp downstream
Tssr32117	transcription start site region 32117	308 bp downstream
Tssr32118	transcription start site region 32118	1180 bp upstream