rs232078199 SNP Detail

Summary

• ID
  rs232078199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:118453681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACTGTGAC ACAAATATAT AATGAGCAGT
  GTATCCAAGA TGAAATTTCA GCAAGGAAAT AGGAAAGAAT TTTAGTTCTT TCTCAATACA
  GCGAATATGT AAACACTACA CAATATATAT GGAAAACATA CAATACATTT CATAGGTAAA
  Y
  ATAACTCCCA ATTTCTGCTG CTCAACTTGT GTGATCTCTC CTCAGCTGCT CTCCTCCATC
  ATCCCCACTG TTATAAGTGA TGCAGGATGG TCATTGGTCT GTATTATTGC TTCTGCACCA
  TTAGTACAAA TGCAATTTGC TCATTGATAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321924597	CHEV_6_118426738	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232078199					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118453681 () rs orientation: forward

Symbol	Name	Function Class
Rr637483	regulatory region 637483	1169 bp proximal
Rr637484	regulatory region 637484	1720 bp proximal
Zfp9	zinc finger protein 9	Intron