rs231852793 SNP Detail

Summary

• ID
  rs231852793
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109373870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTAACCT CCTATGTCAT
  TGTCTTTTGA GACAAGGTTT CTTACATGGA CTGGAGCCTC ATAGATTCAG CTAGGCTGGC
  TGACCAGCAA GTCTCAGGGG TTCACCTATC TTTGTATAGT TTTGGGATTA TAGGCATATC
  CTCATATAAC TTGTTTAAAA ATGTTTCTTT TCCTTTATTT TTAGTTTCCT TTATTTTACA
  T
  TATGGGTATT TTGCCTGTAT GTATGTCTCT GCACCATGTA TGTGCTGTGT CCAAAGAGGC
  CAGAAGAGTG CATTGGATCC TCTGGAACTG GAGTTATAGA TAGTTGTCAG CCACCATGTG
  GACATTGGAA ATCAAACCTG AGTCCTCTGG AAGATCAGCC AGTGTTCTTA ACTGCTGAGT
  CATCCATCTC TCCAGCCCTG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320869283	CHEV_3_109269472	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231852793					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109373870 () rs orientation: forward

Symbol	Name	Function Class
Rr583417	regulatory region 583417	693 bp proximal
Rr583418	regulatory region 583418	1008 bp proximal
Vav3	vav 3 oncogene	Intron