rs231747550 SNP Detail

Summary

• ID
  rs231747550
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130550321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gctAATGGA GACTCTTTAA TTTATAGTAC
  TTATATGACT ACCCTGTGAA AAAAAGAAAG AAAGAGAAAA AAAAAAACCA GTACAGTAAC
  AAGATGAAAA CTATGTGAGC AAATGTGCTT TCAAATAATC CTAAACTGTA CCAGACCAAA
  M
  AAAAAATCAT TTTTGCAGTA AATTTCAGTG ACAGGATTCA AAGGCTATTA GAACACACAC
  TGGAAACTCC ATCTTAAGTA AGGGTAATTT GTTCTGGGTC TATAACAAGG CAGCTTCAGA
  TGTTTTTATG GTAGTTCATT TGATTACTCT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320966480	CHEV_3_130459590	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231747550					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130550321 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13827	CpG island 13827	1625 bp distal
Gm42997	predicted gene 42997	within coordinates
Gm43524	predicted gene 43524	789 bp upstream
Gm65129	predicted gene, 65129	1917 bp downstream
Rr585206	regulatory region 585206	736 bp proximal