rs231653934 SNP Detail

Summary

• ID
  rs231653934
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135665083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttccacgct tgcttttttc ttctagtaca
  attagcccat gacacatgaa gatttaccga gctctaagtg cagcttttat tctatagagg
  acttgaaatt acttatatca acttagaaat cctgcaaaat cattaggaat tatggagtca
  K
  taattcgtct gtccagcatt actatgtgaa agtacatctt catgttggcc tgcagaaagt
  ctgcccaaat agggtgggat aatgcccagg agtccttagg ctgtgtaata gtgacaggaa
  agcgtatcag cagagagacc caatcccggg                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321353515	CHEV_4_135493687	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231653934					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135665083 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fuca1	fucosidase, alpha-L- 1, tissue			Intron
				Noncoding-Transcript-Variant
Rr602205	regulatory region 602205			1343 bp proximal
Rr602206	regulatory region 602206			1377 bp proximal