rs231648237 SNP Detail

Summary

• ID
  rs231648237
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:142843625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTGTAGGCA GACACTAGGT
  CATGGGAGCA AAGTGAGGAC CTTGGAGAGA GCAGGTGACG TAAAGGGACA GGAGCTCTCC
  AAGGCATGAG GGTGGCTGCT GGGTCTCTCT ACCTGGCTTT CACCTGGCTC CTCTCTCTCT
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTGGCACAGA
  Y
  GACATTGGGC CTCACACTGA TGCCTTACCT ATCTCTATAA ATTTGTGGCT CAGTTCACTG
  ACTGGCAATC AGTTCTGGAG CGGAGGTGGA GGGGAAGGCC AAAGGCGTGG AAGCTGGTGT
  CAAGGGAAGA CAAGCCTGAA ACCTCTGCTG AAATCCTCTG TGTACTGAGT GAAGAAGCCA
  CCAGACACCT CCAGCAATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321402598	CHEV_4_142706958	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231648237					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142843625 () rs orientation: forward

Symbol	Name	Function Class
Prdm2	PR domain containing 2, with ZNF domain	Intron
Rr604158	regulatory region 604158	1712 bp proximal