rs231356918 SNP Detail

Summary

• ID
  rs231356918
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54477642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCGGCAG TGGGAACACT
  GGGAAGGGAG CCCTTCATCT TCCCTGGGCA GGAGGGTGCT CTGCAGTGGC TGCTCTGTAC
  ATGTATGGTC TTTGAAATTA CACATCTATT CTCTTTAGCC TTCCTCTTGC GATGATGGAC
  AGTAACCAAA AGCAGTGTGG GGAGAAAAGA GTCCATTTGA CTTCCATTTT CAGGTAACGG
  K
  TTGTCACTGA CAGAAGTCAG GGTGGGAACT CAAGAAGAAG CAGTCAGGAC CTTAGAGAAA
  GCAGTTTTTT TACTGGCTTT CTCCTCGGCT TCTCTAAGCT TGCTTTCTTG TACAGCCCAG
  ACCACTTATC CAGGCAGGTG TAGCTACTCC CACAGTGGGA TGTACCCTTT AATATTAATT
  AGAAATCTAG AAAATGCCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771951	CHEV_3_54374143	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231356918					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54477642 () rs orientation: forward

Symbol	Name	Function Class
Gm65161	predicted gene, 65161	500 bp upstream
Rr576808	regulatory region 576808	1827 bp distal
Rr576809	regulatory region 576809	460 bp proximal
Tssr29130	transcription start site region 29130	304 bp downstream