rs231298830 SNP Detail

Summary

• ID
  rs231298830
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129185449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgctaggga tcaaggccaa gacctccgac
  atgttccatg agcactctac ccactgagct gcggcctcag cTATTACCTG TGTGTGTTTG
  TGTGTTTGCA CAAtgtgtgc gcgtgtgtag aggccagagg tcaattttgt atgtcctcaa
  Y
  ggtttttcaT AGGATCCCTC gctgggtctg gagttcacca gttaagctac aggttctcct
  gccactgcca ttcagtgcca ggcttacagg tgttacccca gggctgtggg ggcccacact
  caggctctcg tgtttgtgtg tggaaagcag                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321311655	CHEV_4_128968900	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231298830					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129185449 () rs orientation: forward

Symbol	Name	Function Class
Sync	syncoilin	Intron