rs231218681 SNP Detail

Summary

• ID
  rs231218681
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115833177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAAGCTT CCCTCAAACG
  AGCTAGAAAT AGAGCTGCCA CCAGGCATTC TTCTCCTGTC ATTGCATGGG TAACTAAAGG
  AATGAAATCA GTGTATTGAA GAGGTGTAGC TGGTCTGTGC TACTTTGTAG GCTCCTTTTT
  CTTCTACCCT TCGCCACCCT TTATCCACCC CTTCAACTCC CTAACACTAG ACAGGAGAGG
  R
  AAAAAAAAGA ATAAAGAGGA GAGAGGAAAA GATCCCTGAA CCTAATTTCT TCTTTCTTTT
  TTTGATCACA ACTACTAATA ACCCTCAACC ACCACCACCC CTGAATGACC AACAACCACC
  ATAGCCCACC AACTACCAAC CTCACCTCTC AAGGTCCTAG CATTTATATG CCCTCTGAAA
  AGTTCCCAGA ATCCAAATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894100	CHEV_3_115742446	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231218681					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115833177 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	1436 bp proximal