rs231215995 SNP Detail

Summary

• ID
  rs231215995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22536771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAGGGCA ACTACAGTAG
  TCTGTATTGT TTGCGCAGCG GGTGTGTGTG TGTGTGTGTG TGTCTTGGAC TCTCCTGACC
  AATGACTTGA AAAGAGGTTT CTCATGCCTA GTTACTGGGG TTTTTGTTGA CTATTAATAT
  AACTACAGTT GCAATTTTAT TTAAAGTCTA TATTCATAAA CATATATAAA TATTATATGT
  R
  AATCTAGATA AATATAAAAA TATGATTCCC TGTTTTGTTT TTTCAAACAT CCTTGGTGTT
  AGTGCCCCCC CTCTATTTTC TATACTCATT CTAATAGTCA AAGCCCCCCT CTGTGTCTCT
  CATTTCCTTC TTCACAGCAT CTGCATACTG CTATTCCTCT CTCTAGAGTC CCTTCTCCCA
  TCCCATAAAC TATATTCTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765800	CHEV_6_22486772	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231215995					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22536771 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	637 bp proximal
Rr627120	regulatory region 627120	693 bp proximal