rs231204237 SNP Detail

Summary

• ID
  rs231204237
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:76885371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTGAGAAT TTCCTCAATC AAAGAAAGGT
  GTAACTTTCA GAATTCCAAA AAGGAAGGGA AAAAAGGCAC TTGAATCTGA AAGCCATCTC
  CAGCCCTTCC TTGGCTCTGT CCAAAGCTGA AGACCTTTTG TTCTGGTGCT TAAGGTAGAC
  K
  CATAATGCCC CGGGGACATA GAGAATCAAG ACCCAGTAAG CAGTTTACGG CTCCTGAGAT
  GTGTTGTGCT GGGACTCTGG GCTCCTCGGT CCATGGTAGA ACTCTTGAAA GCTCCTAGCA
  AGCCTAGCTT ACAATGCTTG AACTCTCAGC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320356918	CHEV_2_76893084	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231204237					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76885371 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ccdc141	coiled-coil domain containing 141			Intron
				Noncoding-Transcript-Variant
Gm75155	predicted gene, 75155			1898 bp upstream
Rr559739	regulatory region 559739			1321 bp proximal