rs231167309 SNP Detail

Summary

• ID
  rs231167309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:15746951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGG GCAAGACCTC CTCAGAGGTC
  R
  AACAACCCTT TCGCAGGGGT CTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321752106	CHEV_6_15696952	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231167309					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:15746951 () rs orientation: forward

Symbol	Name	Function Class
Mdfic	MyoD family inhibitor domain containing	Intron
Rr399574	regulatory region 399574	924 bp downstream
Rr626682	regulatory region 626682	1214 bp distal
Rr626683	regulatory region 626683	686 bp distal
Rr626684	regulatory region 626684	857 bp proximal
Rr626685	regulatory region 626685	1916 bp proximal
Tssr1783	transcription start site region 1783	1649 bp upstream