rs230998115 SNP Detail

Summary

• ID
  rs230998115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101296499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGTTTCA AGAGTAAATT
  TGGGCTGGGC ATGGTGGTGC ACACCTTTAA TCCCAGAAGA GGCGGGTAGA TGTCAAAATG
  TCAAAACCAG CCTGTACAAA GAAAGTTCAA GACTAGCCAG AGCTGTTACA AAAGAAAACC
  TCAAAAAAAT AATAAAAATA AAAATGAGAA ACACAGACAG ACAGACAGAT AGATAGACAG
  R
  CAGGAAAAGG AAAAAACAAA CAAAAACAGT AGATTTGAAA TTGTTGACTC AAACACAATC
  AAGATGGGTT GTATTGGTAT TTTCATCGCA AGAAAGATTG TTAGGACTCT AATCTCACAG
  GAGCAATTGA TGCCCATCAT CAAACCCTGG ACAGCTCCTA CTTCCCTGTC CTGGTGACTA
  TTCATAACAA ATGGCATCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320428385	CHEV_2_101306311	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230998115					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101296499 () rs orientation: forward

Symbol	Name	Function Class
Rr561501	regulatory region 561501	1330 bp distal