rs230918256 SNP Detail

Summary

• ID
  rs230918256
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102710482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCCACTGT TCGTCATAGA
  TACTTAGATT TGTGCCTTTA AAAGGTAGAC ATTATTCATC ACAGATTCAA AATTTTTTAT
  CATGTATTTT CACTGTCTCA TATCTAGTCT GTTACTTCCA AGCAGAGGGG CAGAAAATGT
  GATTATTTCA TTTGTAGAAG TAAAAAAAGA AAAACTAAAA AAACACCCAG TTACACTTCC
  R
  GAGCTATCTG TATGAGATCC CAAGAGAATA ACATAATACC TATGTAGGCA GATTCACCCT
  AACACAACCC CTAGATGACA CCCCAAAGCT CTTATTTGAG ATCCTAAGAC TGGGCAGGCA
  GAACCGTATG GACAGGAAGC TCAGTTCATT TCACTGCCAG AAAGAAACCA ATGCCAAAAC
  AAATATAGGC TTGCTTTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321235124	CHEV_4_102525890	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230918256					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102710482 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm69082	predicted gene, 69082			within coordinates
Rr596318	regulatory region 596318			within coordinates
Rr596319	regulatory region 596319			1851 bp proximal
Sgip1	SH3-domain GRB2-like (endophilin) interacting protein 1			Intron
				Noncoding-Transcript-Variant