rs230832334 SNP Detail

Summary

• ID
  rs230832334
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108429114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACATGAGTC ACCACCTCCA
  AGCCCCCAGC CACCTTCACT GGCACCCATA AAGTTGTTAA TTGTTTTTCT TTGTTACTGT
  TGGTCACAAA TCAATTCTGT GCCTGTTTGA TCTCCCAGTA GTTTTCGGCC AGGATTCAGT
  TACAACTTCC ATTCAGCCAG GGAATTGCTA GTCAATAATA TGTATAGAGC AGCCTAGCAC
  K
  GGTTGGAATG GGACAGAGAA ACAAGTTCTC ATCTTTGGAG CTCATCCTCT CGGACACCTT
  GCTGTGCACC CTACCTGCCT TGACGGCATG ATGCCAGAGT TGGATGCTTT CCCCATACAG
  CAGCAGGACA GCCCTTCCAT AGCTACCATG TCTTTCTTAG CATTATTGTC AGTGACACTT
  CCTAAGAGAA GCCTGGTCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321892724	CHEV_6_108402147	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230832334					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108429114 () rs orientation: forward

Symbol	Name	Function Class
Gm35165	predicted gene, 35165	within coordinates
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636110	regulatory region 636110	1541 bp distal
Rr636111	regulatory region 636111	1490 bp proximal