rs230780448 SNP Detail

Summary

• ID
  rs230780448
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138110501 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTTTGTG AAAATAAACT
  GCAAAACCTG TATCGTGTGC TGGGGGGGGG GCGTTGTGGC GCGGAGAGCG GGGACAGGCT
  GTAATATCAA CTGTGTAGGC GTGTGCGTGT TGCGGTATGG CAGAATGGGA CATCAGCCTT
  GGCTGGGGGT AGGGCACTCA CTTTTTCTTA TATATTTGCT ATTTCTCTTT TTTCATGATC
  K
  TGGGAGAGGA ACTTAATGAT ATTTAATAGA TCTCTAAGGA GTCTAACATC TAGGGCTGCA
  TCCTGTCAGA CAGATACTTA ACCTCTACCG GGGCCTTGGC TGCTCCCTAG GTGTGGTGCC
  CATGGCTGAA CTGTTTAAGG CAGATTTCCC AGGACTCACC ACCATCTACG CCTAAGTGGG
  AAGAATTGGG TGGTCAGCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372980	CHEV_4_137939105	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230780448					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138110501 () rs orientation: forward

Symbol	Name	Function Class
Rr602903	regulatory region 602903	519 bp distal
Rr602904	regulatory region 602904	530 bp proximal